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#softwareheritage

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Simon Tournier

Blog post: What Guix could offer in computational medical environments?

French national agency for secure drug and medicine (ANSM) requires for a medical device to have unambiguous identifications:

1. reference of the product
2. reference of the maker
3. serial number

Well, through my lenses applied to software, it reads:

1. #SoftwareHeritage identifier (#SWHID)
2. #Guix

and 3. is redundant. 😁

Well, a quick summary of a 30min talk I gave past week.

Thanks my previous colleague Sam from APHP to give me the opportunity to brainstorm on this topic. 🤩

simon.tournier.info/posts/2025

simon.tournier.infoWhat Guix could offer in computational medical environments?
#ReproducibleResearch#OpenScience#Debian
Open Science Pasteur

Le catalogue des #LogicielsLibres de l'#ESR est disponible depuis mi-avril en version bêta 👉 logiciels.catalogue-esr.fr/

🔅 Une belle façon de mettre en lumière les logiciels développés dans la recherche académique française ! 🔆

💡 Pour que votre logiciel soit référencé dans ce catalogue : archivez votre code dans #SoftwareHeritage et déposez-le dans #HAL !

@ouvrirlascience #OpenSource #ResearchSoftware #ScienceOuverte

logiciels.catalogue-esr.frSocle Interministériel des Logiciels LibresCatalogue de référence de logiciels libres recommandés pour l'ensemble de l'administration.
Science ouverte UnivRennes

Nouveauté dans #HAL, une fenêtre facilite l'ajout d'un lien entre la publication et les ressources adjacentes : données entreposées dans #Nakala ou #RechercheDataGouv, code source archivé dans #SoftwareHeritage ou ressources provenant d'autres entrepôts qui attribuent un DOI à leurs objets. #HALiance ccsd.cnrs.fr/2025/02/valoriser

Simon Tournier

☕ break? #Guix #HPC activity report is out! 🎉

Check it out:

hpc.guix.info/blog/2025/02/gui

The seventh report, time flies! Highlight of key achievements:

• More than 57,000 packages, Guix + related channels for scientific packages;
• Performance and portability: more about MPI;
• ROCm/HIP software stack for AMD GPUs upgrades;
• Migration of Guix-Science channel to Codeberg;
• New version of Guix-Jupyter;
• Common Workflow Language #CWL + Guix = ❤️ : ccwl and ravanan;
• Ensuring Source Code Availability: #SoftwareHeritage rescue mode;
• Re-Deploying Software from the Past;
• Supporting Artifact Evaluation at SuperComputing 2024;
• “Package to Container image” conversion pipeline, #DIAMOND and #DIADEM;
• Digital Electronics Design;
• Reproducible Multiphysics Simulation and Workflows;
• Impact of Hardware Variability;
• Toward Guix on French Tier-1 and EuroHPC Tier-0 machines;
• Pangenome Genetics Research
• Supporting RISC-V
• List of articles, talks, tutorials, events, training sessions.
• … and more…

What a year, isn’t it? 😀

hpc.guix.infoGuix-HPC — Guix-HPC Activity Report, 2024
#ReproducibleResearch#OpenScience
Simon Tournier

The video of my talk about #Guix and @swheritage at #FOSDEM25 is released!

The conclusion is:

• Cite and reference source code using #SoftwareHeritage identifier;

• Use Guix!

Packed in 20 minutes, check out the arguments.

Feel free to raise your questions. 😀

fosdem.org/2025/schedule/event

Thanks @FosdemResearch for the organization of this devroom.

fosdem.orgFOSDEM 2025 - Guix + Software Heritage: Source Code Archiving to the Rescue of Reproducible Deployment
Continued thread
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Stefano Zacchiroli

@zimoun will present « Guix + #SoftwareHeritage Source Code Archiving to the Rescue of Reproducible Deployment » on Saturday: fosdem.org/2025/schedule/event

The presentation is about the work we did to integrate GNU #Guix with the @swheritage archive, so that when users try to (re)build packages whose source code has disappeared from the new, it will still work!

This is key for scientific #reproducibility. See our #ACMREP paper from last year for more details: upsilon.cc/~zack/research/publ

fosdem.orgFOSDEM 2025 - Guix + Software Heritage: Source Code Archiving to the Rescue of Reproducible Deployment
#FOSDEM
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