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#variants

2 posts1 participant2 posts today
sport of sacred spherical cows<p>Raj's dashboard, updated this morning, shows PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG overtaken by child XFG.2; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.</p><p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.<br> <br><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>'s most recent Friday dataset, updated Tuesday June 24, showed Nimbus taking plurality, with Stratus XFG family also gaining share.</p><p>Despite notice of moving to "longer reporting periods", for reason of "low number of sequences being reported" (see dot-hatching in below chart reflecting"less reliable" data), now three-weeks old dataset was still for periods two-weeks each.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Raj's dashboard, last updated July 3, showed PQ.2 as standout child of Nimbus NB.1.8.1 / PQ; Stratus XFG in competition with kids XFG.2 and XFG.3; and LP.8.1 long ago overshadowed by LP.8.1.1/ NY.</p><p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June saw Nimbus NB.1.8.1 / PQ, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.<br> <br><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>'s most recent Friday dataset, updated Tuesday June 24, showed Nimbus taking plurality, with Stratus XFG family also gaining share.</p><p>Despite notice of moving to "longer reporting periods", for reason of "low number of sequences being reported" (see dot-hatching in below chart reflecting"less reliable" data), now three-weeks old dataset was still for periods two-weeks each.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>FDA vaccine target LP.8.1, dominant since March, plateaued in April. June sees Nimbus NB.1.8.1, scion of "razor-blade throat" XDV, push LP.8.1 out of majority.</p><p><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> adds NB.1.8.1 only in latest, late-published public dataset. "Software error" that heralded data delay remains unresolved. Hatching for "less reliable" data reflects "low numbers of sequences being reported".<br> <br>Raj's dashboard, updated Sunday, shows Nimbus diversifying in May.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Since March, LP.8.1 has been dominant. FDA designates same as vaccine target, on very week its share has plateaued.<br> <br>Data collection continues to be low priority nationally—as exactly zero regions have enough data for CDC to plot.</p><p>No new variants broken out by <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a>, although the "razor blade throat" variant, NB.1.8.1, remains significant in GISAID.</p><p>Raj's dashboard was last updated yesterday.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Updated <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> estimates show we'd pretty much been in a JN.1.11 soup since Dec, until late March, when LP.8.1 took majority.</p><p>Data collection continues to be low priority nationally—as exactly zero regions have enough data for CDC to plot.</p><p>CDC breaks out recombinant XFC from FLiRT parent LF.7 . (Our dataviz now identifies parentage for each recombinant.) Raj's dashboard was last updated today.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Updated <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> estimates show we'd pretty much been in a JN.1.11 soup since Dec, until late March, when LP.8.1 took majority.</p><p>Data collection continues to be a low priority nationally, as exactly zero regions have enough data for CDC to plot.</p><p>Two children of LF.7.7, dot1 and dot2, broken out by CDC, together with PA.1, a grandchild of MC.10.</p><p>Raj's dashboard was last updated a week ago today.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
Jen, The Scrunklylukewarm /hj take about #hashtags
sport of sacred spherical cows<p>Updated <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> estimates show we've pretty much been in a JN.1.11 soup since Dec, until late March, when LP.8.1 took majority.</p><p>Data collection continues to be a low priority nationally, as exactly zero regions have enough data for CDC to plot.</p><p>No new variants broken out, yet CDC seems to have resources to tailor their color key: <a href="https://hcommons.social/@beadsland/114163320179234281" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">hcommons.social/@beadsland/114</span><span class="invisible">163320179234281</span></a></p><p>Raj's dashboard was updated on today.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Updated <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> estimates show we've pretty much been in a JN.1.11 soup since Dec, until late March, when LP.8.1 took majority.</p><p>Data collection continues to be a low priority nationally, as only one region (NY/NJ) has enough data for CDC to plot.</p><p>No new variants broken out, yet CDC seems to have resources to tailor their color key: <a href="https://hcommons.social/@beadsland/114163320179234281" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">hcommons.social/@beadsland/114</span><span class="invisible">163320179234281</span></a></p><p>Raj's dashboard was updated on Sunday.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Second time <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> has reported estimates for more than two regions at a time since October.</p><p>To be clear, national data used for chart above are modeled on regional data collection.</p><p>LP.8.1 now estimated at majority in Great Lakes, nearing majority in NY/NJ and Mid-Atlantic.</p><p>XEC (incl. XEC.4) still around a quarter share in all three regions.</p><p>[For color key, see: <a href="https://covid.cdc.gov/covid-data-tracker/#variant-proportions" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">covid.cdc.gov/covid-data-track</span><span class="invisible">er/#variant-proportions</span></a>]</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/WearAMask" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WearAMask</span></a> <a href="https://hcommons.social/tags/BetterMasks" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>BetterMasks</span></a></p>
sport of sacred spherical cows<p>A FLuQE wavelet opened September, cresting as KP.3.1.1 / MC wave into November. FDA's second-guess vaccine target, KP.2, dropped out in December. Updated <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> estimates indicate we've been in a JN.1.11 soup pretty much since then. </p><p>No new variants broken out by CDC, as KP.1.1.3 / LP descendant LP.8.1 approaches majority.</p><p>No recent GISAID data—as Raj's dashboard hasn't updated in near a month.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
Eric's Risk Assessment<p>Frequency, kinetics and determinants of viable <a href="https://zeroes.ca/tags/SARSCoV2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARSCoV2</span></a> in <a href="https://zeroes.ca/tags/bioaerosols" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioaerosols</span></a> from ambulatory <a href="https://zeroes.ca/tags/COVID19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>COVID19</span></a> patients infected with the Beta, Delta or Omicron <a href="https://zeroes.ca/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a></p><p><a href="https://www.nature.com/articles/s41467-024-45400-1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">nature.com/articles/s41467-024</span><span class="invisible">-45400-1</span></a></p><p>&gt; Half of Covid-19 patients emitted infectious virus in respiratory particles smaller than 5 microns (&gt;30 min to settle out). Culturability of aerosols was associated with lower neutralizing antibody titers, so immune response matters for transmission potential. </p><p><a href="https://zeroes.ca/tags/COVIDisAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>COVIDisAirborne</span></a> <a href="https://zeroes.ca/tags/sars2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>sars2</span></a></p>
sport of sacred spherical cows<p>Updated GISAID data for late January has FluQE31 KP.3.1.1 / MC and children down to just over a fifth of all sequences.</p><p>FLiRT KS.1.1 / FLuQE KP.3.3 hybrid XEC down near two fifths.</p><p>LP.8.1 and child LP.8.1.1 / NY together already another fifth.</p><p>Meanwhile, in remaining fifth:<br>• JN.1 FLiRT descendant LF.7 remains diverse despite pressure; and<br>• XEQ (recombinant of FLiRT KS.1.1.2 and KP.3) continues to stand out.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a></p>
sport of sacred spherical cows<p><a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> has long time now been piloting the craft of <a href="https://hcommons.social/tags/PublicHealth" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>PublicHealth</span></a> sans navigational equipment.</p><p>To be clear, national data used for chart above are modeled on regional data collection.</p><p>Given little data we do have, LP.8.1 has gained majority status in NY/NJ and Great Lakes regions, XEC still majority in Mtn/Dakotas, with cousin XEQ prominent.</p><p>[For color key, see: <a href="https://covid.cdc.gov/covid-data-tracker/#variant-proportions" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">covid.cdc.gov/covid-data-track</span><span class="invisible">er/#variant-proportions</span></a>]</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/WearAMask" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WearAMask</span></a> <a href="https://hcommons.social/tags/BetterMasks" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>BetterMasks</span></a></p>
sport of sacred spherical cows<p>After January's FLiRT soup (JN.1 and JN.1.11 lineages vying for dominance), we've returned to JN.1.11 soup (FLiRT and FLuQE clusters competing), that began when FLuQE majority ended in November.</p><p>After no data two weeks ago, <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> updated variant estimates.</p><p>Raj has updated dashboard Sunday with new GISAID sequences. As of data two weeks ago, XEC.8 joins XEC.2 and LP.8.1.1 / NY as significant.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>After no data two weeks ago, <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> updates variant estimates.</p><p>After January's FLiRT soup (JN.1 and JN.1.11 lineages vying for dominance), we've returned to JN.1.11 soup (FLiRT and FLuQE clusters competing), that began when FLuQE majority ended in November.</p><p>There's been insufficient GISAID data for Raj to update U.S. dashboard. Might assume LP.8.1.1 / NY continues to drive growth of LP.8.1 fam.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Updated GISAID data early-mid January has FluQE31 KP.3.1.1 / MC and children down to under a third of all sequences.</p><p>FLiRT KS.1.1 / FLuQE KP.3.3 hybrid XEC now over two fifths.</p><p>JN.1 FLiRT descendant LF.7 is diversifying, while LP.8.1.1 / NY, MC.8.1, and XEQ (recombinant of FLiRT KS.1.1.2 and KP.3) all stand out.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a></p>
sport of sacred spherical cows<p>A FLuQE wavelet opened September, becoming MC wave into November. December saw both FLiRT clans and JN.1.11 vie for dominance, only for JN.1 FLiRT to win out.</p><p>Although <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> did update metadata today, data remains unchanged from two weeks ago.</p><p>At that time, FLiRT KS.1.1 / FLuQE KP.3.3 hybrid XEC family—never having reached majority—was being pressed by FLiRT LP.8.1.</p><p>New GISAID data from Raj.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
sport of sacred spherical cows<p>Updated GISAID data entering January has FluQE31 KP.3.1.1 / MC and children down to just over a third of all sequences.</p><p>FLiRT KS.1.1 / FLuQE KP.3.3 hybrid XEC now approaching two fifths.</p><p>JN.1 FLiRT descendant LF.7 is diversifying, while KP.1.1.3 / LP scion LP.8.1, and recombinant XEL—child of JN.1 and FLiRT KS.1.1.2—both stand out.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a></p>
sport of sacred spherical cows<p>A FLuQE wavelet opened September, becoming MC wave into November. December saw both FLiRT clans and JN.1.11 vie for dominance, only for JN.1 FLiRT to win out.</p><p>After skipping update two weeks prior, <a href="https://hcommons.social/tags/CDC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CDC</span></a> broke out XEC.4, as FLiRT KS.1.1 / FLuQE KP.3.3 hybrid XEC family—never having reached majority—being pressed by FLiRT LP.8.1.</p><p>New dashboard from Raj givs us more recent GISAID data.</p><p>❖ <a href="https://hcommons.social/tags/ThisIsOurPolio" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ThisIsOurPolio</span></a> <a href="https://hcommons.social/tags/Covid" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid</span></a> <a href="https://hcommons.social/tags/Covid19" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Covid19</span></a> <a href="https://hcommons.social/tags/SARS2" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SARS2</span></a> <a href="https://hcommons.social/tags/variants" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>variants</span></a> <a href="https://hcommons.social/tags/CovidIsNotOver" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsNotOver</span></a> <a href="https://hcommons.social/tags/CovidIsAirborne" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CovidIsAirborne</span></a> <a href="https://hcommons.social/tags/dataviz" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>dataviz</span></a> <a href="https://hcommons.social/tags/datavis" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>datavis</span></a></p>
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