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#reproducibility

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Dorothy Bishop<p>This bluesky thread by Mark Hanson describes a massive project to look at <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> of drosophila studies - I don't know much about that area, but the approach is pretty exciting and has potential for other topics. <a href="https://bsky.app/profile/hansonmark.bsky.social/post/3ltlvkkxyak2k" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">bsky.app/profile/hansonmark.bs</span><span class="invisible">ky.social/post/3ltlvkkxyak2k</span></a></p>
Björn Brembs<p>The killer quote! Prestigious institutions and prestigious journals drive irreproducibility in the life sciences - well, at least in this particular sample.</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.social/tags/impactfactor" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>impactfactor</span></a></p>
Björn Brembs<p>And yet another one in the ever increasing list of analyses showing that top journals are bad for science:</p><p>"Thus, our analysis show major claims published in low-impact journals are significantly more likely to be reproducible than major claims published in trophy journals. "</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/publishing" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>publishing</span></a> <a href="https://mastodon.social/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
Björn Brembs<p>To my knowledge, first time that not only prestigious journals, but also prestigious institutions are implicated as major drivers of irreproducibility:</p><p>"Higher representation of challenged claims in trophy journals and from top universities"</p><p><a href="https://www.biorxiv.org/content/10.1101/2025.07.07.663460v2" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">biorxiv.org/content/10.1101/20</span><span class="invisible">25.07.07.663460v2</span></a></p><p><a href="https://mastodon.social/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a> <a href="https://mastodon.social/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a></p>
Pete Bachant<p>Tips for using Jupyter notebooks as part of a reproducible workflow (one that goes from raw data to research article with a single command): <a href="https://docs.calkit.org/notebooks" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">docs.calkit.org/notebooks</span><span class="invisible"></span></a></p><p><a href="https://fediscience.org/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://fediscience.org/tags/jupyter" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>jupyter</span></a> <a href="https://fediscience.org/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a></p>
UniversityofGroningenLibrary<p>We invite staff and students at the University of <a href="https://social.edu.nl/tags/Groningen" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Groningen</span></a> to share how they are making <a href="https://social.edu.nl/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> or <a href="https://social.edu.nl/tags/teaching" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>teaching</span></a> more open, accessible, transparent, or reproducible, for the 6th annual <a href="https://social.edu.nl/tags/OpenResearch" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenResearch</span></a> Award. </p><p>Looking for inspiration?<br>Explore the case studies submitted in previous years:<br>🔗 <a href="https://www.rug.nl/research/openscience/open-research-award/previous-events" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">rug.nl/research/openscience/op</span><span class="invisible">en-research-award/previous-events</span></a></p><p>More info:<br>🔗 <a href="https://www.rug.nl/research/openscience/open-research-award/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="ellipsis">rug.nl/research/openscience/op</span><span class="invisible">en-research-award/</span></a></p><p><a href="https://social.edu.nl/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://social.edu.nl/tags/OpenEducation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenEducation</span></a> <a href="https://social.edu.nl/tags/OpenAccess" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenAccess</span></a> <a href="https://social.edu.nl/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <br><span class="h-card" translate="no"><a href="https://mastodon.social/@oscgroningen" class="u-url mention" rel="nofollow noopener" target="_blank">@<span>oscgroningen</span></a></span></p>
Elen Le Foll 🇫🇷 🇬🇧 🇩🇪<p>Jack Taylor is now presenting a new <a href="https://fediscience.org/tags/Rstats" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Rstats</span></a> package: "LexOPS: A Reproducible Solution to Stimuli Selection". Jack bravely did a live demonstration based on a German corpus ("because we're in Germany") that generated matched stimuli that certainly made the audience giggle... let's just say that one match involved the word "Erektion"... 😂 </p><p>There is a paper about the LexOPS package: <a href="https://link.springer.com/article/10.3758/s13428-020-01389-1" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">link.springer.com/article/10.3</span><span class="invisible">758/s13428-020-01389-1</span></a> and a detailed tutorial: <a href="https://jackedtaylor.github.io/LexOPSdocs/index.html" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jackedtaylor.github.io/LexOPSd</span><span class="invisible">ocs/index.html</span></a>. Also a <a href="https://fediscience.org/tags/Shiny" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Shiny</span></a> app for those who really don't want to use R, but that allows code download for <a href="https://fediscience.org/tags/reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>reproducibility</span></a>: <a href="https://jackedtaylor.github.io/LexOPSdocs/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jackedtaylor.github.io/LexOPSd</span><span class="invisible">ocs/</span></a> Really cool and useful project! <a href="https://fediscience.org/tags/WoReLa1" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WoReLa1</span></a> <a href="https://fediscience.org/tags/linguistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>linguistics</span></a> <a href="https://fediscience.org/tags/psycholinguistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>psycholinguistics</span></a></p>
OSTrails<p>At <a href="https://mastodon.social/tags/EGI2025" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EGI2025</span></a>, OSTrails received the Best Poster Award for showcasing practical, cross-domain tools that support <a href="https://mastodon.social/tags/FAIR" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIR</span></a>, open, and reproducible science.</p><p>Our contribution focused on making research workflows more efficient and researcher-centric, not more complex.</p><p>-Read our reflections and outcomes from the event: <a href="https://shorturl.at/nnfs0" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">shorturl.at/nnfs0</span><span class="invisible"></span></a></p><p><a href="https://mastodon.social/tags/OpenScience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenScience</span></a> <a href="https://mastodon.social/tags/OSTrails" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OSTrails</span></a> <a href="https://mastodon.social/tags/Reproducibility" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Reproducibility</span></a> <a href="https://mastodon.social/tags/FAIRdata" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>FAIRdata</span></a> <a href="https://mastodon.social/tags/DMP" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DMP</span></a> <a href="https://mastodon.social/tags/Metadata" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Metadata</span></a> <a href="https://mastodon.social/tags/ResearchTools" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ResearchTools</span></a> <a href="https://mastodon.social/tags/EOSC" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>EOSC</span></a> <a href="https://mastodon.social/tags/SciencePolicy" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>SciencePolicy</span></a></p>
Continued thread

7/ Wei Mun Chan, Research Integrity Manager

With 10+ years in publishing and data curation, Wei Mun ensures every paper meets our high standards for ethics and #reproducibility. From image checks to data policies, he’s the quiet force keeping the scientific record trustworthy.

Are you an educator and wondering if and how to include #preregistration into student assignments? Then join our #webinar and learn from our speakers!

🗓️ 26 June
⌚ 13:30 -15 hrs
register here:
events.teams.microsoft.com/eve

Ewout Meijer from Maastricht University and Elen Le Foll from the University of Cologne will share their experiences with having students preregister their term papers and theses work.

We will make a recording of the webinar available.
#openScience #reproducibility

How reproducible is research in digital art history?
Béatrice Joyeux-Prunel argues for a post-computational framework that complements FAIR data with ethics, expertise & interpretive validation.
link.springer.com/article/10.1
#DigitalHumanities #Reproducibility #FAIREST #DigitalArtHistory #OpenScience

SpringerLinkDigital humanities in the era of digital reproducibility: towards a fairest and post-computational framework - International Journal of Digital HumanitiesReproducibility has become a requirement in the hard sciences, and its adoption is gradually extending to the digital humanities. The FAIR criteria and the publication of data papers are both indicative of this trend. However, the question that arises is whether the strict prerequisites of digital reproducibility serve only to exclude digital humanities from broader humanities scholarship. Instead of adopting a binary approach, an alternative method acknowledges the unique features of the objects, inquiries, and techniques of the humanities, including digital humanities, as well as the social and historical contexts in which the concept of reproducibility has developed in the human sciences. In the first part of this paper, I propose to examine the historical and disciplinary context in which the concept of reproducibility has developed within the human sciences, and the disciplinary struggles involved in this process, especially for art history and literature studies. In the second part, I will explore the question of reproducibility through two art history research projects that utilize various computational methods. I argue that issues of corpus, method, and interpretation cannot be separated, rendering a procedural definition of reproducibility impractical. Consequently, I propose the adoption of ‘post-computational reproducibility’, which is based on FAIREST criteria as far as digital corpora are concerned (FAIR + Ethics and Expertise, Source mention + Time-Stamp), but extended to include further sources that confirm computational results with other non-computational methodologies.

🎙"#Reproducibility isn’t just about repeating results, it’s about making the #research process transparent, so others can follow the path you took and understand how you got there."

🎧Listen to our new OpenScience podcast with Sarahanne Field @smirandafield

🔗 rug.nl/research/openscience/po

⏳ In this 10 min episode, Sarahanne reimagines reproducibility for #qualitative research.
She addresses challenges in ethical #data sharing of transcripts, and the importance of clear methodological reporting.