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Fabrizio Musacchio<p>✍️ New in <a href="https://sigmoid.social/tags/eLife" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>eLife</span></a>: <a href="https://sigmoid.social/tags/CellSeg3D" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CellSeg3D</span></a> introduces <a href="https://sigmoid.social/tags/WNet3D" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>WNet3D</span></a>, a self-supervised 3D <a href="https://sigmoid.social/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> method for <a href="https://sigmoid.social/tags/microscopy" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>microscopy</span></a> data — no labels needed. Claims to outperform <a href="https://sigmoid.social/tags/Cellpose" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Cellpose</span></a>/#StarDist on 4 datasets. Includes <a href="https://sigmoid.social/tags/opensource" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>opensource</span></a> plugin (<a href="https://sigmoid.social/tags/Napari" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Napari</span></a>) + full 3D annotated <a href="https://sigmoid.social/tags/cortex" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>cortex</span></a> dataset. Will test it later. </p><p>🌍 <a href="https://elifesciences.org/articles/99848" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">elifesciences.org/articles/998</span><span class="invisible">48</span></a></p><p><a href="https://sigmoid.social/tags/DeepLearning" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>DeepLearning</span></a> <a href="https://sigmoid.social/tags/Neuroscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Neuroscience</span></a></p>
nf-core<p>Pipeline release! nf-core/molkart v1.1.0 - 1.1.0 - Resolution Road!</p><p>Please see the changelog: <a href="https://github.com/nf-core/molkart/releases/tag/1.1.0" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">github.com/nf-core/molkart/rel</span><span class="invisible">eases/tag/1.1.0</span></a></p><p><a href="https://mstdn.science/tags/fish" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>fish</span></a> <a href="https://mstdn.science/tags/imageprocessing" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>imageprocessing</span></a> <a href="https://mstdn.science/tags/imaging" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>imaging</span></a> <a href="https://mstdn.science/tags/molecularcartography" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>molecularcartography</span></a> <a href="https://mstdn.science/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> <a href="https://mstdn.science/tags/singlecell" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>singlecell</span></a> <a href="https://mstdn.science/tags/spatial" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>spatial</span></a> <a href="https://mstdn.science/tags/transcriptomics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>transcriptomics</span></a> <a href="https://mstdn.science/tags/nfcore" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>nfcore</span></a> <a href="https://mstdn.science/tags/openscience" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>openscience</span></a> <a href="https://mstdn.science/tags/nextflow" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>nextflow</span></a> <a href="https://mstdn.science/tags/bioinformatics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>bioinformatics</span></a></p>
The vOICe vision BCI 🧠🇪🇺<p>Multi-faceted sensory substitution for curb alerting: A pilot investigation in persons with blindness and low vision <a href="https://arxiv.org/abs/2408.14578" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">arxiv.org/abs/2408.14578</span><span class="invisible"></span></a> using <a href="https://mas.to/tags/YOLO" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>YOLO</span></a> v8 <a href="https://mas.to/tags/AI" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AI</span></a> <a href="https://mas.to/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a>, <a href="https://mas.to/tags/The_vOICe" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>The_vOICe</span></a></p>
ALTA<p>In the lead up to <a href="https://sigmoid.social/tags/ALTA2024" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ALTA2024</span></a>, we're highlighting <a href="https://sigmoid.social/tags/research" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>research</span></a> papers from previous <a href="https://sigmoid.social/tags/workshops" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>workshops</span></a>. </p><p>Here, the ChatGPT C-LARA-Instance, Belinda Chiera, Cathy Chua, Chadi Raheb, Manny Rayner, Annika Simonsen, Zhengkang Xiang, and Rina Zviel-Girshin use the <a href="https://sigmoid.social/tags/OpenSource" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>OpenSource</span></a> <a href="https://sigmoid.social/tags/CLARA" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CLARA</span></a> platform to evaluate <a href="https://sigmoid.social/tags/GPT4" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>GPT4</span></a>'s ability to perform <a href="https://sigmoid.social/tags/linguistics" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>linguistics</span></a> <a href="https://sigmoid.social/tags/NLP" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>NLP</span></a> tasks such as <a href="https://sigmoid.social/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a>, <a href="https://sigmoid.social/tags/lemmatization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>lemmatization</span></a> and <a href="https://sigmoid.social/tags/glossing" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>glossing</span></a>. </p><p>🔗 C-LARA platform: <a href="https://www.c-lara.org/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://www.</span><span class="">c-lara.org/</span><span class="invisible"></span></a></p><p>🔗 Paper: <a href="https://aclanthology.org/2023.alta-1.3/" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">aclanthology.org/2023.alta-1.3</span><span class="invisible">/</span></a></p>
JCLS<p>Not on novels, but on Holocaust survivor testimonials: </p><p>Eitan Wagner, Renana Keydar, Amir Pinchevski &amp; Omri Abend (2023). "Automatic Topic-Guided Segmentation of Holocaust Survivor Testimonies", Journal of Computational Literary Studies 2 (1), 1–26. doi: <a href="https://doi.org/10.48694/jcls.3580" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="">doi.org/10.48694/jcls.3580</span><span class="invisible"></span></a>. </p><p>Keywords: <a href="https://fedihum.org/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a>, <a href="https://fedihum.org/tags/spoken" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>spoken</span></a> narratives, <a href="https://fedihum.org/tags/testimonies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>testimonies</span></a>, <a href="https://fedihum.org/tags/narrative" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>narrative</span></a> analysis, <a href="https://fedihum.org/tags/topic" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>topic</span></a> analysis, mutual information, <a href="https://fedihum.org/tags/NLP" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>NLP</span></a> <a href="https://fedihum.org/tags/CLS" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>CLS</span></a> <a href="https://fedihum.org/tags/JCLS" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>JCLS</span></a></p>
Michel Mariani<p>Unicopedia Plus is a developer-oriented set of Unicode, Unihan, Unikemet &amp; emoji utilities wrapped into one single app, built with <a href="https://mastodon.social/tags/Electron" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Electron</span></a>.</p><p>Repository: 🔗 <a href="https://codeberg.org/tonton-pixel/unicopedia-plus" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">codeberg.org/tonton-pixel/unic</span><span class="invisible">opedia-plus</span></a></p><p><a href="https://mastodon.social/tags/characters" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>characters</span></a> <a href="https://mastodon.social/tags/chinese" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>chinese</span></a> <a href="https://mastodon.social/tags/cjk" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>cjk</span></a> <a href="https://mastodon.social/tags/codepoints" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>codepoints</span></a> <a href="https://mastodon.social/tags/desktopapplication" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>desktopapplication</span></a> <a href="https://mastodon.social/tags/electronjs" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>electronjs</span></a> <a href="https://mastodon.social/tags/emoji" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>emoji</span></a> <a href="https://mastodon.social/tags/ivd" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ivd</span></a> <a href="https://mastodon.social/tags/japanese" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>japanese</span></a> <a href="https://mastodon.social/tags/javascript" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>javascript</span></a> <a href="https://mastodon.social/tags/kangxi" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>kangxi</span></a> <a href="https://mastodon.social/tags/kangxiradicals" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>kangxiradicals</span></a> <a href="https://mastodon.social/tags/korean" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>korean</span></a> <a href="https://mastodon.social/tags/normalization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>normalization</span></a> <a href="https://mastodon.social/tags/opensource" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>opensource</span></a> <a href="https://mastodon.social/tags/regex" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>regex</span></a> <a href="https://mastodon.social/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> <a href="https://mastodon.social/tags/strokecount" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>strokecount</span></a> <a href="https://mastodon.social/tags/unicode" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>unicode</span></a> <a href="https://mastodon.social/tags/unicopedia" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>unicopedia</span></a> <a href="https://mastodon.social/tags/unihan" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>unihan</span></a> <a href="https://mastodon.social/tags/unikemet" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>unikemet</span></a></p>
Kevin Lossner<p>Importing SRX <a href="https://c.im/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> rules to <a href="https://c.im/tags/memoQ" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>memoQ</span></a> (video):</p><p><a href="https://youtu.be/_VSpTCgBeu0" rel="nofollow noopener" target="_blank"><span class="invisible">https://</span><span class="">youtu.be/_VSpTCgBeu0</span><span class="invisible"></span></a></p><p><a href="https://c.im/tags/xl8" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>xl8</span></a> <a href="https://c.im/tags/translation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>translation</span></a> <br><a href="https://c.im/tags/l10n" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>l10n</span></a> <a href="https://c.im/tags/localization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>localization</span></a> <br><a href="https://c.im/tags/TranslationStudies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>TranslationStudies</span></a></p>
Kevin Lossner<p>Changing the language of <a href="https://c.im/tags/memoQ" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>memoQ</span></a> <a href="https://c.im/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> rules (video):</p><p><a href="https://youtu.be/dBWMgHfCBdM" rel="nofollow noopener" target="_blank"><span class="invisible">https://</span><span class="">youtu.be/dBWMgHfCBdM</span><span class="invisible"></span></a></p><p><a href="https://c.im/tags/xl8" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>xl8</span></a> <a href="https://c.im/tags/translation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>translation</span></a> <br><a href="https://c.im/tags/l10n" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>l10n</span></a> <a href="https://c.im/tags/localization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>localization</span></a> <br><a href="https://c.im/tags/TranslationStudies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>TranslationStudies</span></a></p>
Kevin Lossner<p>"The Case of Semicolon Segmentation"</p><p>A tutorial video made in response to a <a href="https://c.im/tags/memoQ" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>memoQ</span></a> user asking about how to customize <a href="https://c.im/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> rules so there will *always* be a break at semicolons.</p><p>With a special guest appearance by the memoQ <a href="https://c.im/tags/Regex" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>Regex</span></a> Assistant library....</p><p><a href="https://youtu.be/U0L94wyh2-M" rel="nofollow noopener" target="_blank"><span class="invisible">https://</span><span class="">youtu.be/U0L94wyh2-M</span><span class="invisible"></span></a></p><p><a href="https://c.im/tags/xl8" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>xl8</span></a> <a href="https://c.im/tags/translation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>translation</span></a> <br><a href="https://c.im/tags/l10n" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>l10n</span></a> <a href="https://c.im/tags/localization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>localization</span></a> <br><a href="https://c.im/tags/TranslationStudies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>TranslationStudies</span></a></p>
Kevin Lossner<p>My talk of 5 October 2023 on bad text <a href="https://c.im/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> and how to identify it is now available on YouTube with a time-coded index in the description.</p><p><a href="https://youtu.be/OnInakY5cac?si=3TdEtQwdC8ntxunm" rel="nofollow noopener" target="_blank"><span class="invisible">https://</span><span class="ellipsis">youtu.be/OnInakY5cac?si=3TdEtQ</span><span class="invisible">wdC8ntxunm</span></a></p><p><a href="https://c.im/tags/xl8" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>xl8</span></a> <a href="https://c.im/tags/translation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>translation</span></a> <br><a href="https://c.im/tags/l10n" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>l10n</span></a> <a href="https://c.im/tags/localization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>localization</span></a> <br><a href="https://c.im/tags/TranslationStudies" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>TranslationStudies</span></a></p>
Niklas Alt<p>Hi fediverse, is anyone aware of <a href="https://fedihum.org/tags/opensource" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>opensource</span></a> pipelines for <a href="https://fedihum.org/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a> / <a href="https://fedihum.org/tags/vectorization" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>vectorization</span></a> of <a href="https://fedihum.org/tags/historical" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>historical</span></a> <a href="https://fedihum.org/tags/cadastral" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>cadastral</span></a> maps? Ideally a workflow to train <a href="https://fedihum.org/tags/AI" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AI</span></a> / <a href="https://fedihum.org/tags/ML" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>ML</span></a> models on specific mapsets, e.g. the new prussian survey after 1870*, the francisceian (mid 19th century) or the bavarian*** to only mention the largest surveys in central Europe. I suspect that people outside of history are working on it, these maps are a true treasure for <a href="https://fedihum.org/tags/environmental" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>environmental</span></a> and <a href="https://fedihum.org/tags/biodiversity" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>biodiversity</span></a> research. Links are in the reply</p>
Oliver Mantell<p>A new role with the University of Leicester (in partnership with us at The Audience Agency) looking at how <a href="https://zirk.us/tags/AI" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>AI</span></a> can support cultural <a href="https://zirk.us/tags/segmentation" class="mention hashtag" rel="nofollow noopener" target="_blank">#<span>segmentation</span></a>: <a href="https://jobs.le.ac.uk/vacancies/8889/data-scientist-for-cultural-audience-segmentation-ktp-associate.html" rel="nofollow noopener" translate="no" target="_blank"><span class="invisible">https://</span><span class="ellipsis">jobs.le.ac.uk/vacancies/8889/d</span><span class="invisible">ata-scientist-for-cultural-audience-segmentation-ktp-associate.html</span></a></p><p>It is, of course, potentially a huge can of worms (!), but I'm hoping it will enable greater nuance, flexibility, learning and local/sector specificity - as well as more robust evidence of what works... (and done with partners who place social value and impact first).</p>

When considering whether to upgrade the #segmentation rules used by a #translation environment tool, it may be helpful to examine certain text structure occurrences in:

* a large document or
* a TMX file (which #memoQ can import as a "translation document")

Typically, these structures are a period (".") followed by a space, in turn followed by a capital letter, a number or a symbol. There are, of course, other relevant cases which can be defined, but I think these are the most common.

That can be expressed in regex by:

\.\s(\p{S}|\p{N}|\p{Lu})

Try filtering with that #regex and see if you find any useful segments for testing!

transtrib-tech.teachable.com/c

Continued thread

In T. cancriformis (and other notostracans), the posterior legs get smaller and smaller, and closer and closer together while the dorsal segmentation stays regular. This disjunct in segmentation occurred at least by the Permian, and possibly earlier. What the hell, Triops? Follow the rules! For this and other reasons, I'd REALLY like to the HOX genes of branchiopods explored in more detail. #evodevo #segmentation
7/7

As is mastodon tradition, time for an intro.
I'm a prof in McGill’s FoM (Depts Neurology & Neurosurgery / #BME). My lab (nist.mni.mcgill.ca) at #TheNeuro builds #opensoftware for image #registration and #segmentation. We characterize #brain structures over time in healthy people, and in patients with disease in #neurology and #neuroscience. In #neurosurgery, we develop tools for image guided surgery with #AR using #ultrasound to account for brain shift. Looking forward to hearing from you.